Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 RPS8P6-201ENST00000426177 609 ntBASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 AC098859.1-201ENST00000502915 1238 ntBASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 FAM215A-202ENST00000632077 792 ntBASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 AC007064.4-201ENST00000637740 555 ntBASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 HSPA7-201ENST00000445535 1927 ntBASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 REXO1L2P-201ENST00000425429 2069 ntBASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.27□□□□□ -0.28
MEIS3P1A6NDR6 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 RHOQP3-201ENST00000437982 621 ntBASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 AC098831.1-202ENST00000438821 336 ntBASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 RNA5SP410-201ENST00000516285 106 ntBASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 HNRNPUP1-201ENST00000554987 333 ntBASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 AL049840.3-201ENST00000602669 611 ntBASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 BCAR1-209ENST00000546196 1340 ntBASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 AC025580.3-201ENST00000617932 1424 ntBASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 FOXO1B-201ENST00000504678 1527 ntBASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MEIS3P1A6NDR6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms