Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 RPL13P2-201ENST00000440687 659 ntBASIC15.68■□□□□ 0.1
CCDC78A2IDD5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 SPDYE18-201ENST00000510091 1050 ntBASIC15.68■□□□□ 0.1
CCDC78A2IDD5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 AC074044.1-201ENST00000609673 707 ntBASIC15.68■□□□□ 0.1
CCDC78A2IDD5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 AC126365.1-201ENST00000578585 1514 ntBASIC15.68■□□□□ 0.1
CCDC78A2IDD5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 AC087499.5-201ENST00000452760 1342 ntBASIC15.68■□□□□ 0.1
CCDC78A2IDD5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC78A2IDD5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AC006058.4-201ENST00000624016 1670 ntBASIC15.67■□□□□ 0.1
CCDC78A2IDD5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AC015922.1-201ENST00000421102 1152 ntBASIC15.67■□□□□ 0.1
CCDC78A2IDD5 TSSK5P-201ENST00000423978 907 ntBASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AC241585.1-201ENST00000433527 519 ntBASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AL390955.2-201ENST00000603032 514 ntBASIC15.67■□□□□ 0.1
CCDC78A2IDD5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AC004461.2-201ENST00000629517 803 ntBASIC15.67■□□□□ 0.1
CCDC78A2IDD5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC78A2IDD5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms