Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCH2Q9Y6C5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PTCH2Q9Y6C5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCH2Q9Y6C5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCH2Q9Y6C5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCH2Q9Y6C5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCH2Q9Y6C5 FKBP4P6-201ENST00000457486 1332 ntBASIC17.16■□□□□ 0.34
PTCH2Q9Y6C5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 E2F3P2-201ENST00000447755 1422 ntBASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 VDAC1P1-201ENST00000439229 848 ntBASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 HLA-J-204ENST00000495278 958 ntBASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 AL603764.1-201ENST00000636452 321 ntBASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCH2Q9Y6C5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PTCH2Q9Y6C5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCH2Q9Y6C5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 AP000593.2-201ENST00000542775 1433 ntBASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 AC006449.6-201ENST00000612330 2296 ntBASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCH2Q9Y6C5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms