Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 AC104989.1-201ENST00000519711 778 ntBASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 SLC25A47P1-201ENST00000531577 414 ntBASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 AC120045.2-201ENST00000567334 178 ntBASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 AC097359.3-201ENST00000603982 1210 ntBASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 MIR600HG-201ENST00000449175 5984 ntBASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 AC018665.1-201ENST00000622927 1362 ntBASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 AL121723.1-201ENST00000445194 1519 ntBASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 AC092384.3-202ENST00000564646 2873 ntBASIC12.16□□□□□ -0.46
TSSC4Q9Y5U2 PRAL-201ENST00000624952 3286 ntBASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 AL355864.2-201ENST00000447420 863 ntBASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 KRT223P-202ENST00000449164 1292 ntBASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 VDAC1P7-201ENST00000462417 847 ntBASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 USP32P1-208ENST00000506594 1164 ntBASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TSSC4Q9Y5U2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms