Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 CLUHP6-201ENST00000580789 941 ntBASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 LINC01101-201ENST00000622953 1884 ntBASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 SOCS2P1-201ENST00000417727 557 ntBASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 AC133539.2-201ENST00000604757 467 ntBASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 BX539320.1-201ENST00000623759 877 ntBASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BLOC1S4Q9NUP1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 RNU1-114P-201ENST00000365297 166 ntBASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 AP001582.1-201ENST00000525856 295 ntBASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BLOC1S4Q9NUP1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms