Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 AC005912.2-201ENST00000619492 2400 ntBASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.69□□□□□ -0.22
COMMD4Q9H0A8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 AL353705.2-201ENST00000428243 662 ntBASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 SPCS2P4-201ENST00000436160 681 ntBASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 AC243562.1-201ENST00000560672 389 ntBASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 CICP11-201ENST00000434745 2827 ntBASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 UXT-AS1-201ENST00000590504 1525 ntBASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.68□□□□□ -0.22
COMMD4Q9H0A8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 DMBT1P1-203ENST00000636837 4628 ntBASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AP3S2-216ENST00000617003 1561 ntBASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 CICP14-201ENST00000629111 2732 ntBASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms