Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 AC044860.1-202ENST00000559481 777 ntBASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
YIPF4Q9BSR8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
YIPF4Q9BSR8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
YIPF4Q9BSR8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.58□□□□□ -0.07
YIPF4Q9BSR8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.58□□□□□ -0.07
YIPF4Q9BSR8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
YIPF4Q9BSR8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.58□□□□□ -0.07
YIPF4Q9BSR8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
YIPF4Q9BSR8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AGAP7P-201ENST00000582299 2062 ntBASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AGAP14-201ENST00000624701 2060 ntBASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 TSPY16P-201ENST00000449843 468 ntBASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AL390754.1-201ENST00000619088 582 ntBASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 OR2I1P-209ENST00000641730 5365 ntBASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 AC100757.3-201ENST00000622361 1406 ntBASIC14.58□□□□□ -0.08
YIPF4Q9BSR8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms