Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 REXO1L4P-201ENST00000605109 1937 ntBASIC16.33■□□□□ 0.21
TRIM11Q96F44 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM11Q96F44 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
TRIM11Q96F44 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM11Q96F44 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 AC079416.2-201ENST00000625035 1193 ntBASIC16.33■□□□□ 0.2
TRIM11Q96F44 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 LINC02228-204ENST00000642115 2962 ntBASIC16.33■□□□□ 0.2
TRIM11Q96F44 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM11Q96F44 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM11Q96F44 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 AC097376.2-205ENST00000610159 5334 ntBASIC16.32■□□□□ 0.2
TRIM11Q96F44 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRIM11Q96F44 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM11Q96F44 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 AL390755.1-201ENST00000623716 2027 ntBASIC16.31■□□□□ 0.2
TRIM11Q96F44 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 KRT18P28-201ENST00000453838 1332 ntBASIC16.31■□□□□ 0.2
TRIM11Q96F44 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM11Q96F44 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 AC009477.1-201ENST00000452936 217 ntBASIC16.31■□□□□ 0.2
TRIM11Q96F44 MEIS3P1-201ENST00000495167 958 ntBASIC16.31■□□□□ 0.2
TRIM11Q96F44 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM11Q96F44 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms