Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.35■□□□□ 0.05
ECHDC3Q96DC8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ECHDC3Q96DC8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.35■□□□□ 0.05
ECHDC3Q96DC8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ECHDC3Q96DC8 MST1L-201ENST00000442552 2185 ntBASIC15.35■□□□□ 0.05
ECHDC3Q96DC8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ECHDC3Q96DC8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ECHDC3Q96DC8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.35■□□□□ 0.05
ECHDC3Q96DC8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.35■□□□□ 0.05
ECHDC3Q96DC8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ECHDC3Q96DC8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 GK-202ENST00000378941 458 ntTSL 3 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 EIF3FP3-201ENST00000434851 1086 ntBASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 AC025279.2-201ENST00000569730 653 ntBASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 AC011270.2-201ENST00000624293 2550 ntBASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 REXO1L5P-201ENST00000622260 2098 ntBASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.34■□□□□ 0.05
ECHDC3Q96DC8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
ECHDC3Q96DC8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ECHDC3Q96DC8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.33■□□□□ 0.05
ECHDC3Q96DC8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
ECHDC3Q96DC8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ECHDC3Q96DC8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
ECHDC3Q96DC8 AL157414.3-201ENST00000624276 1954 ntBASIC15.33■□□□□ 0.05
ECHDC3Q96DC8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 FTH1P14-201ENST00000482930 551 ntBASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 AC006486.2-201ENST00000624246 2199 ntBASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 WASH3P-207ENST00000560956 1394 ntBASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ECHDC3Q96DC8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ECHDC3Q96DC8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 1139 ms