Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 RPL5P21-201ENST00000404620 815 ntBASIC14.89□□□□□ -0.03
VPS33AQ96AX1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS33AQ96AX1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 AL592309.1-201ENST00000443127 649 ntBASIC14.88□□□□□ -0.03
VPS33AQ96AX1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 AP000845.1-201ENST00000581677 2131 ntBASIC14.88□□□□□ -0.03
VPS33AQ96AX1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 AC084121.4-201ENST00000641598 221 ntBASIC14.88□□□□□ -0.03
VPS33AQ96AX1 AF228730.8-201ENST00000642140 221 ntBASIC14.88□□□□□ -0.03
VPS33AQ96AX1 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 LINC01230-201ENST00000625222 3017 ntBASIC14.88□□□□□ -0.03
VPS33AQ96AX1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms