Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 RPL13AP20-201ENST00000459725 609 ntBASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 AL133338.1-201ENST00000565695 1517 ntBASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 AC114812.1-204ENST00000449669 728 ntBASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 AC023310.1-201ENST00000554836 735 ntBASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 DUX4L45-201ENST00000566406 1057 ntBASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 RN7SL560P-201ENST00000577943 264 ntBASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 AC145423.3-201ENST00000615987 467 ntBASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP6V0A1Q93050 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 AC020907.1-201ENST00000616460 1350 ntBASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP6V0A1Q93050 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms