Protein–RNA interactions for Protein: Q8TF40

FNIP1, Folliculin-interacting protein 1, humanhuman

Predictions only

Length 1,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNIP1Q8TF40 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNIP1Q8TF40 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FNIP1Q8TF40 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 SLC7A15P-201ENST00000424028 1363 ntBASIC16.06■□□□□ 0.16
FNIP1Q8TF40 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 SPTLC1P1-201ENST00000447199 261 ntBASIC16.06■□□□□ 0.16
FNIP1Q8TF40 INGX-202ENST00000489074 768 ntBASIC16.06■□□□□ 0.16
FNIP1Q8TF40 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 AC093813.1-201ENST00000605066 256 ntBASIC16.06■□□□□ 0.16
FNIP1Q8TF40 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FNIP1Q8TF40 AL390755.1-201ENST00000623716 2027 ntBASIC16.06■□□□□ 0.16
FNIP1Q8TF40 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 AL138799.1-201ENST00000448213 1675 ntBASIC16.05■□□□□ 0.16
FNIP1Q8TF40 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 AJ011932.1-201ENST00000621707 465 ntBASIC16.05■□□□□ 0.16
FNIP1Q8TF40 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FNIP1Q8TF40 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 LILRP1-201ENST00000444199 1370 ntBASIC16.04■□□□□ 0.16
FNIP1Q8TF40 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
FNIP1Q8TF40 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms