Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SETD9Q8NE22 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.21□□□□□ -0.13
SETD9Q8NE22 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SETD9Q8NE22 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SETD9Q8NE22 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SETD9Q8NE22 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SETD9Q8NE22 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
SETD9Q8NE22 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.21□□□□□ -0.13
SETD9Q8NE22 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SETD9Q8NE22 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SETD9Q8NE22 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.21□□□□□ -0.14
SETD9Q8NE22 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.21□□□□□ -0.14
SETD9Q8NE22 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
SETD9Q8NE22 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SETD9Q8NE22 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SETD9Q8NE22 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.21□□□□□ -0.14
SETD9Q8NE22 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.2□□□□□ -0.14
SETD9Q8NE22 SAPCD2P3-201ENST00000455031 850 ntBASIC14.2□□□□□ -0.14
SETD9Q8NE22 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 SPTSSB-204ENST00000617024 1292 ntBASIC14.2□□□□□ -0.14
SETD9Q8NE22 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 MST1P2-201ENST00000457982 2291 ntBASIC14.2□□□□□ -0.14
SETD9Q8NE22 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SETD9Q8NE22 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SETD9Q8NE22 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SETD9Q8NE22 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SETD9Q8NE22 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.19□□□□□ -0.14
SETD9Q8NE22 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SETD9Q8NE22 AC138969.3-201ENST00000546612 1459 ntBASIC14.19□□□□□ -0.14
SETD9Q8NE22 AC138932.2-201ENST00000548268 1459 ntBASIC14.19□□□□□ -0.14
SETD9Q8NE22 AC126755.4-201ENST00000549796 1459 ntBASIC14.19□□□□□ -0.14
SETD9Q8NE22 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SETD9Q8NE22 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SETD9Q8NE22 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SETD9Q8NE22 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SETD9Q8NE22 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SETD9Q8NE22 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.19□□□□□ -0.14
SETD9Q8NE22 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms