Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 MIR4745-201ENST00000577608 62 ntBASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 SRD5A3P1-201ENST00000603021 949 ntBASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 AC139749.1-202ENST00000617529 3139 ntBASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 AC006486.2-201ENST00000624246 2199 ntBASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 AC092337.1-201ENST00000568699 1129 ntBASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SIMC1Q8NDZ2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
SIMC1Q8NDZ2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 BTBD7P1-201ENST00000447253 1453 ntBASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 AL121723.1-201ENST00000445194 1519 ntBASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms