Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AC002472.2-201ENST00000442739 958 ntBASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 FAM207CP-201ENST00000443486 507 ntBASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 MIR4745-201ENST00000577608 62 ntBASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 LINC02560-201ENST00000596379 459 ntBASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 AL391069.4-201ENST00000609583 481 ntBASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
C11orf42Q8N5U0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 AC138969.2-201ENST00000532739 9932 ntBASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 AC236430.1-201ENST00000402231 743 ntBASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 SLED1-202ENST00000512051 380 ntBASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 AC104794.3-201ENST00000566840 1248 ntBASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 AC009118.2-201ENST00000613275 655 ntBASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 AC008761.3-201ENST00000624803 892 ntBASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 AC105250.1-201ENST00000509378 2057 ntBASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
C11orf42Q8N5U0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 AC009090.5-201ENST00000624886 2285 ntBASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 GNAQP1-201ENST00000444815 1067 ntBASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 MEIS3P1-201ENST00000495167 958 ntBASIC12.91□□□□□ -0.34
C11orf42Q8N5U0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms