Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CRLF3Q8IUI8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CRLF3Q8IUI8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CRLF3Q8IUI8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CRLF3Q8IUI8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CRLF3Q8IUI8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CRLF3Q8IUI8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CRLF3Q8IUI8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CRLF3Q8IUI8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 INTS4P1-203ENST00000641008 3683 ntBASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 AC023141.5-201ENST00000458585 616 ntBASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 AC079140.1-201ENST00000508039 487 ntBASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 AL355385.1-201ENST00000606123 409 ntBASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.49■□□□□ 0.07
CRLF3Q8IUI8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 AKAP8P1-201ENST00000434743 1349 ntBASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 AL592309.1-201ENST00000443127 649 ntBASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 AC243562.1-201ENST00000560672 389 ntBASIC15.48■□□□□ 0.07
CRLF3Q8IUI8 AC093520.2-201ENST00000561830 333 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms