Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 MRPS18AP1-201ENST00000414458 589 ntBASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 AC004890.2-204ENST00000481968 304 ntBASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 ZNF890P-202ENST00000530367 1156 ntBASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 AC011467.4-201ENST00000594891 528 ntBASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 AC000095.1-201ENST00000603208 874 ntBASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 AC093512.1-201ENST00000617969 520 ntBASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 AC015656.1-201ENST00000624209 3578 ntBASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE8Q86YQ8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 INTS4P1-203ENST00000641008 3683 ntBASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 AC241585.1-201ENST00000433527 519 ntBASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 AC092337.1-201ENST00000568699 1129 ntBASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 AC106028.4-201ENST00000614509 607 ntBASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CPNE8Q86YQ8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 AP001267.2-201ENST00000532619 2086 ntBASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 AC055876.3-201ENST00000431496 288 ntBASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE8Q86YQ8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms