Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 KRT8P48-201ENST00000515599 1220 ntBASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 KRT8P23-201ENST00000560090 1207 ntBASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 AC107918.4-201ENST00000641966 3141 ntBASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 AL928921.2-201ENST00000641325 2442 ntBASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 AC079140.1-201ENST00000508039 487 ntBASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 AC084121.4-201ENST00000641598 221 ntBASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 AF228730.8-201ENST00000642140 221 ntBASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 OR2I1P-209ENST00000641730 5365 ntBASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRTM1Q86UE6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRTM1Q86UE6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms