Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AJ011931.1-201ENST00000618749 2492 ntBASIC14.15□□□□□ -0.14
SMARCD3Q6STE5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
SMARCD3Q6STE5 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.15□□□□□ -0.15
SMARCD3Q6STE5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SMARCD3Q6STE5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SMARCD3Q6STE5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SMARCD3Q6STE5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 HIST3H2BA-201ENST00000436555 524 ntBASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 AC005829.1-201ENST00000570002 483 ntBASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 AC003101.2-201ENST00000612557 442 ntBASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.14□□□□□ -0.15
SMARCD3Q6STE5 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 FAM58DP-201ENST00000428076 619 ntBASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms