Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.06■□□□□ 0
SGO1Q5FBB7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SGO1Q5FBB7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.06■□□□□ 0
SGO1Q5FBB7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.06■□□□□ 0
SGO1Q5FBB7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.06■□□□□ 0
SGO1Q5FBB7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SGO1Q5FBB7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SGO1Q5FBB7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SGO1Q5FBB7 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.06■□□□□ 0
SGO1Q5FBB7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 HLA-J-203ENST00000494367 1087 ntBASIC15.06■□□□□ 0
SGO1Q5FBB7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.06■□□□□ 0
SGO1Q5FBB7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.06■□□□□ 0
SGO1Q5FBB7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.06■□□□□ 0
SGO1Q5FBB7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.06■□□□□ 0
SGO1Q5FBB7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.06■□□□□ 0
SGO1Q5FBB7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 SPDYE12P-201ENST00000618416 771 ntBASIC15.06■□□□□ 0
SGO1Q5FBB7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SGO1Q5FBB7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.06■□□□□ 0
SGO1Q5FBB7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SGO1Q5FBB7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.06■□□□□ 0
SGO1Q5FBB7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.06■□□□□ 0
SGO1Q5FBB7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.06■□□□□ 0
SGO1Q5FBB7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.06■□□□□ 0
SGO1Q5FBB7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGO1Q5FBB7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.05■□□□□ 0
SGO1Q5FBB7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
SGO1Q5FBB7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.05■□□□□ 0
SGO1Q5FBB7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
SGO1Q5FBB7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.05■□□□□ 0
SGO1Q5FBB7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SGO1Q5FBB7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SGO1Q5FBB7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.05■□□□□ -0
SGO1Q5FBB7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.05■□□□□ -0
SGO1Q5FBB7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.05■□□□□ -0
SGO1Q5FBB7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 AC125807.1-201ENST00000483097 614 ntBASIC15.05■□□□□ -0
SGO1Q5FBB7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.05■□□□□ -0
SGO1Q5FBB7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.05■□□□□ -0
SGO1Q5FBB7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.05■□□□□ -0
SGO1Q5FBB7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.05■□□□□ -0
SGO1Q5FBB7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.05■□□□□ -0
SGO1Q5FBB7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
SGO1Q5FBB7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.05■□□□□ -0
SGO1Q5FBB7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SGO1Q5FBB7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.05■□□□□ -0
SGO1Q5FBB7 AL138828.2-201ENST00000615812 383 ntBASIC15.05■□□□□ -0
SGO1Q5FBB7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.05■□□□□ -0
SGO1Q5FBB7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 TUBB3P1-201ENST00000405796 1332 ntBASIC15.05■□□□□ -0
SGO1Q5FBB7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.05■□□□□ -0
SGO1Q5FBB7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SGO1Q5FBB7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
SGO1Q5FBB7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SGO1Q5FBB7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.05■□□□□ -0
SGO1Q5FBB7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGO1Q5FBB7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms