Protein–RNA interactions for Protein: Q08E93

FAM27E3, Protein FAM27E3, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27E3Q08E93 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27E3Q08E93 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27E3Q08E93 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FAM27E3Q08E93 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 AC026691.1-201ENST00000602502 2017 ntBASIC13.37□□□□□ -0.27
FAM27E3Q08E93 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 AC105250.1-201ENST00000509378 2057 ntBASIC13.37□□□□□ -0.27
FAM27E3Q08E93 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 HOMER2P2-201ENST00000451621 847 ntBASIC13.37□□□□□ -0.27
FAM27E3Q08E93 Z93015.1-201ENST00000451718 390 ntBASIC13.37□□□□□ -0.27
FAM27E3Q08E93 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 AC099548.2-209ENST00000480264 625 ntBASIC13.37□□□□□ -0.27
FAM27E3Q08E93 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 ENPP7P14-201ENST00000621765 1040 ntBASIC13.37□□□□□ -0.27
FAM27E3Q08E93 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.37□□□□□ -0.27
FAM27E3Q08E93 AL645728.2-202ENST00000641679 227 ntBASIC13.37□□□□□ -0.27
FAM27E3Q08E93 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
FAM27E3Q08E93 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 RPL5P21-201ENST00000404620 815 ntBASIC13.36□□□□□ -0.27
FAM27E3Q08E93 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 BTBD6P1-201ENST00000412176 1267 ntBASIC13.36□□□□□ -0.27
FAM27E3Q08E93 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.36□□□□□ -0.27
FAM27E3Q08E93 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms