Protein–RNA interactions for Protein: Q01668

CACNA1D, Voltage-dependent L-type calcium channel subunit alpha-1D, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1DQ01668 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.71□□□□□ -0.22
CACNA1DQ01668 ENPP7P5-201ENST00000541031 1031 ntBASIC13.71□□□□□ -0.22
CACNA1DQ01668 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.71□□□□□ -0.22
CACNA1DQ01668 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CACNA1DQ01668 AC135983.4-201ENST00000564116 1262 ntBASIC13.71□□□□□ -0.22
CACNA1DQ01668 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CACNA1DQ01668 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CACNA1DQ01668 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.71□□□□□ -0.22
CACNA1DQ01668 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CACNA1DQ01668 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CACNA1DQ01668 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.7□□□□□ -0.22
CACNA1DQ01668 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CACNA1DQ01668 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 AL592424.1-201ENST00000563624 1536 ntBASIC13.7□□□□□ -0.22
CACNA1DQ01668 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.7□□□□□ -0.22
CACNA1DQ01668 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CACNA1DQ01668 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 AL139010.1-201ENST00000454878 894 ntBASIC13.7□□□□□ -0.22
CACNA1DQ01668 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1DQ01668 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CACNA1DQ01668 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.7□□□□□ -0.22
CACNA1DQ01668 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CACNA1DQ01668 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.7□□□□□ -0.22
CACNA1DQ01668 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CACNA1DQ01668 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.69□□□□□ -0.22
CACNA1DQ01668 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 AC124283.3-201ENST00000570869 594 ntBASIC13.69□□□□□ -0.22
CACNA1DQ01668 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 RN7SL555P-201ENST00000584742 339 ntBASIC13.69□□□□□ -0.22
CACNA1DQ01668 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 AC024909.3-201ENST00000611513 2257 ntBASIC13.69□□□□□ -0.22
CACNA1DQ01668 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 AC018635.2-201ENST00000608625 364 ntBASIC13.69□□□□□ -0.22
CACNA1DQ01668 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 AC244452.3-201ENST00000636814 210 ntBASIC13.69□□□□□ -0.22
CACNA1DQ01668 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.69□□□□□ -0.22
CACNA1DQ01668 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CACNA1DQ01668 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CACNA1DQ01668 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms