Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.25□□□□□ -0.29
ABCA4P78363 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.25□□□□□ -0.29
ABCA4P78363 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.25□□□□□ -0.29
ABCA4P78363 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA4P78363 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.25□□□□□ -0.29
ABCA4P78363 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.25□□□□□ -0.29
ABCA4P78363 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA4P78363 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA4P78363 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 MTHFR-217ENST00000641820 1569 ntBASIC13.25□□□□□ -0.29
ABCA4P78363 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA4P78363 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 CNN2P10-201ENST00000443067 918 ntBASIC13.25□□□□□ -0.29
ABCA4P78363 SERPINA13P-202ENST00000478994 924 ntBASIC13.25□□□□□ -0.29
ABCA4P78363 AP003171.2-201ENST00000528208 925 ntBASIC13.25□□□□□ -0.29
ABCA4P78363 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA4P78363 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.25□□□□□ -0.29
ABCA4P78363 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
ABCA4P78363 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ABCA4P78363 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA4P78363 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ABCA4P78363 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ABCA4P78363 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA4P78363 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA4P78363 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA4P78363 PCDHB19P-201ENST00000570871 2371 ntBASIC13.24□□□□□ -0.29
ABCA4P78363 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ABCA4P78363 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ABCA4P78363 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA4P78363 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.24□□□□□ -0.29
ABCA4P78363 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.24□□□□□ -0.29
ABCA4P78363 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.24□□□□□ -0.29
ABCA4P78363 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA4P78363 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.24□□□□□ -0.29
ABCA4P78363 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
ABCA4P78363 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ABCA4P78363 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 AC124067.4-201ENST00000519691 2379 ntBASIC13.24□□□□□ -0.29
ABCA4P78363 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA4P78363 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
ABCA4P78363 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA4P78363 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.24□□□□□ -0.29
ABCA4P78363 AC091046.1-201ENST00000331871 207 ntBASIC13.24□□□□□ -0.29
ABCA4P78363 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ABCA4P78363 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ABCA4P78363 AL139094.1-201ENST00000405549 1188 ntBASIC13.24□□□□□ -0.29
ABCA4P78363 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA4P78363 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms