Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC8.96□□□□□ -0.98
TMEM258P61165 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
TMEM258P61165 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC8.96□□□□□ -0.98
TMEM258P61165 HES4-202ENST00000428771 1040 ntTSL 2 BASIC8.96□□□□□ -0.98
TMEM258P61165 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC8.96□□□□□ -0.98
TMEM258P61165 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC8.96□□□□□ -0.98
TMEM258P61165 AC024563.2-201ENST00000603282 481 ntBASIC8.96□□□□□ -0.98
TMEM258P61165 AC124016.1-201ENST00000609552 612 ntBASIC8.96□□□□□ -0.98
TMEM258P61165 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
TMEM258P61165 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 AL713866.1-201ENST00000563320 3125 ntBASIC8.96□□□□□ -0.98
TMEM258P61165 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC8.96□□□□□ -0.98
TMEM258P61165 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC8.96□□□□□ -0.98
TMEM258P61165 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
TMEM258P61165 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
TMEM258P61165 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC8.96□□□□□ -0.98
TMEM258P61165 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
TMEM258P61165 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 INE2-201ENST00000630399 1874 ntBASIC8.96□□□□□ -0.98
TMEM258P61165 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TMEM258P61165 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
TMEM258P61165 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC8.95□□□□□ -0.98
TMEM258P61165 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 LRRC55-201ENST00000497933 5410 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
TMEM258P61165 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 AC015818.9-201ENST00000591705 4582 ntBASIC8.95□□□□□ -0.98
TMEM258P61165 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
TMEM258P61165 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC8.95□□□□□ -0.98
TMEM258P61165 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
TMEM258P61165 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 AC010141.2-201ENST00000452426 721 ntBASIC8.95□□□□□ -0.98
TMEM258P61165 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 AC002558.1-201ENST00000488906 803 ntBASIC8.95□□□□□ -0.98
TMEM258P61165 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
TMEM258P61165 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC8.95□□□□□ -0.98
TMEM258P61165 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 ITIH5-209ENST00000613909 2916 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TMEM258P61165 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
TMEM258P61165 AL135905.2-201ENST00000584934 1404 ntBASIC8.95□□□□□ -0.98
TMEM258P61165 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
TMEM258P61165 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms