Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB5BP61020 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
RAB5BP61020 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
RAB5BP61020 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB5BP61020 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
RAB5BP61020 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
RAB5BP61020 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB5BP61020 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 PCDHB17P-202ENST00000623466 3066 ntBASIC12.07□□□□□ -0.48
RAB5BP61020 AL022323.5-201ENST00000624101 2059 ntBASIC12.07□□□□□ -0.48
RAB5BP61020 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
RAB5BP61020 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB5BP61020 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB5BP61020 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.07□□□□□ -0.48
RAB5BP61020 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB5BP61020 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB5BP61020 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 CCR12P-201ENST00000446203 998 ntBASIC12.07□□□□□ -0.48
RAB5BP61020 MTCL1P1-201ENST00000446207 792 ntBASIC12.07□□□□□ -0.48
RAB5BP61020 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
RAB5BP61020 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB5BP61020 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RAB5BP61020 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.07□□□□□ -0.48
RAB5BP61020 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB5BP61020 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
RAB5BP61020 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB5BP61020 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 FAM90A12P-201ENST00000519497 2375 ntBASIC12.07□□□□□ -0.48
RAB5BP61020 FAM90A24P-201ENST00000520792 2369 ntBASIC12.07□□□□□ -0.48
RAB5BP61020 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
RAB5BP61020 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.07□□□□□ -0.48
RAB5BP61020 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
RAB5BP61020 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB5BP61020 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB5BP61020 CICP1-201ENST00000416803 2410 ntBASIC12.07□□□□□ -0.48
RAB5BP61020 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RAB5BP61020 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB5BP61020 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.06□□□□□ -0.48
RAB5BP61020 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
RAB5BP61020 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB5BP61020 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RAB5BP61020 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB5BP61020 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 AC103564.2-201ENST00000432853 1299 ntBASIC12.06□□□□□ -0.48
RAB5BP61020 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.06□□□□□ -0.48
RAB5BP61020 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB5BP61020 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB5BP61020 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.06□□□□□ -0.48
RAB5BP61020 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.06□□□□□ -0.48
RAB5BP61020 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms