Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GPC3P51654 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GPC3P51654 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC3P51654 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC3P51654 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.97■□□□□ 0.31
GPC3P51654 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 RNU1-114P-201ENST00000365297 166 ntBASIC16.97■□□□□ 0.31
GPC3P51654 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GPC3P51654 C2orf27AP3-201ENST00000434123 579 ntBASIC16.97■□□□□ 0.31
GPC3P51654 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GPC3P51654 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.97■□□□□ 0.31
GPC3P51654 AL583810.1-201ENST00000553344 1045 ntBASIC16.97■□□□□ 0.31
GPC3P51654 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.97■□□□□ 0.31
GPC3P51654 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.97■□□□□ 0.31
GPC3P51654 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.97■□□□□ 0.31
GPC3P51654 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.97■□□□□ 0.31
GPC3P51654 AL354718.3-201ENST00000616414 581 ntBASIC16.97■□□□□ 0.31
GPC3P51654 MIR6799-201ENST00000620297 69 ntBASIC16.97■□□□□ 0.31
GPC3P51654 CR382287.1-201ENST00000623954 586 ntBASIC16.97■□□□□ 0.31
GPC3P51654 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC3P51654 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
GPC3P51654 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GPC3P51654 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
GPC3P51654 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC3P51654 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC3P51654 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GPC3P51654 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC3P51654 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 REXO1L6P-201ENST00000603433 1515 ntBASIC16.96■□□□□ 0.31
GPC3P51654 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC3P51654 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.96■□□□□ 0.31
GPC3P51654 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 CNN2P8-201ENST00000421872 913 ntBASIC16.96■□□□□ 0.31
GPC3P51654 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
GPC3P51654 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC3P51654 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC3P51654 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.96■□□□□ 0.31
GPC3P51654 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.96■□□□□ 0.31
GPC3P51654 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
GPC3P51654 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.96■□□□□ 0.31
GPC3P51654 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.96■□□□□ 0.31
GPC3P51654 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.96■□□□□ 0.31
GPC3P51654 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GPC3P51654 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC3P51654 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC3P51654 AC145423.3-201ENST00000615987 467 ntBASIC16.96■□□□□ 0.31
GPC3P51654 RHOXF1P1-202ENST00000635473 501 ntBASIC16.96■□□□□ 0.31
GPC3P51654 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC3P51654 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 AC112693.3-201ENST00000624819 1983 ntBASIC16.96■□□□□ 0.31
GPC3P51654 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
GPC3P51654 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
GPC3P51654 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
GPC3P51654 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GPC3P51654 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC3P51654 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GPC3P51654 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC3P51654 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GPC3P51654 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
GPC3P51654 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GPC3P51654 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
GPC3P51654 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GPC3P51654 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GPC3P51654 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GPC3P51654 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GPC3P51654 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
GPC3P51654 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC3P51654 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC3P51654 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms