Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC1A1P43005 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A1P43005 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 KRT18P13-201ENST00000400056 1290 ntBASIC16.15■□□□□ 0.18
SLC1A1P43005 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC1A1P43005 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A1P43005 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A1P43005 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A1P43005 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC1A1P43005 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A1P43005 AC044860.1-202ENST00000559481 777 ntBASIC16.15■□□□□ 0.18
SLC1A1P43005 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SLC1A1P43005 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC1A1P43005 AC092337.1-201ENST00000568699 1129 ntBASIC16.15■□□□□ 0.18
SLC1A1P43005 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A1P43005 AL158211.3-201ENST00000607385 239 ntBASIC16.15■□□□□ 0.18
SLC1A1P43005 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC1A1P43005 AC004461.2-201ENST00000629517 803 ntBASIC16.15■□□□□ 0.18
SLC1A1P43005 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC1A1P43005 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC1A1P43005 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC1A1P43005 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A1P43005 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC1A1P43005 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC1A1P43005 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.18
SLC1A1P43005 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC1A1P43005 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC1A1P43005 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC1A1P43005 AC007787.1-201ENST00000588095 1583 ntBASIC16.14■□□□□ 0.17
SLC1A1P43005 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC1A1P43005 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC1A1P43005 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC1A1P43005 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC1A1P43005 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.14■□□□□ 0.17
SLC1A1P43005 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC1A1P43005 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC1A1P43005 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.14■□□□□ 0.17
SLC1A1P43005 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC1A1P43005 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC1A1P43005 SAMD11P1-201ENST00000571429 661 ntBASIC16.14■□□□□ 0.17
SLC1A1P43005 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC1A1P43005 AL844908.2-201ENST00000609461 460 ntBASIC16.14■□□□□ 0.17
SLC1A1P43005 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
SLC1A1P43005 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC1A1P43005 AC023908.3-201ENST00000564211 3047 ntBASIC16.14■□□□□ 0.17
SLC1A1P43005 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
SLC1A1P43005 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC1A1P43005 AC126755.1-201ENST00000525846 6405 ntBASIC16.14■□□□□ 0.17
SLC1A1P43005 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.14■□□□□ 0.17
SLC1A1P43005 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC1A1P43005 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC1A1P43005 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A1P43005 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A1P43005 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A1P43005 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 AC007191.1-201ENST00000623179 2995 ntBASIC16.13■□□□□ 0.17
SLC1A1P43005 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC1A1P43005 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A1P43005 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms