Protein–RNA interactions for Protein: P28749

RBL1, Retinoblastoma-like protein 1, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1P28749 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RBL1P28749 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RBL1P28749 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RBL1P28749 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RBL1P28749 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RBL1P28749 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RBL1P28749 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RBL1P28749 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
RBL1P28749 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RBL1P28749 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.83■□□□□ 0.12
RBL1P28749 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
RBL1P28749 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.83■□□□□ 0.12
RBL1P28749 AC104457.1-201ENST00000401024 814 ntBASIC15.83■□□□□ 0.12
RBL1P28749 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.83■□□□□ 0.12
RBL1P28749 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.83■□□□□ 0.12
RBL1P28749 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.83■□□□□ 0.12
RBL1P28749 FAM8A3P-201ENST00000427218 844 ntBASIC15.83■□□□□ 0.12
RBL1P28749 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.83■□□□□ 0.12
RBL1P28749 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.83■□□□□ 0.12
RBL1P28749 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 AC008738.7-201ENST00000609744 511 ntBASIC15.83■□□□□ 0.12
RBL1P28749 AC093512.1-201ENST00000617969 520 ntBASIC15.83■□□□□ 0.12
RBL1P28749 AL158212.4-201ENST00000624062 1286 ntBASIC15.83■□□□□ 0.12
RBL1P28749 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 AC004840.1-201ENST00000636359 365 ntBASIC15.83■□□□□ 0.12
RBL1P28749 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.83■□□□□ 0.12
RBL1P28749 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.83■□□□□ 0.12
RBL1P28749 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.83■□□□□ 0.12
RBL1P28749 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.83■□□□□ 0.12
RBL1P28749 BTBD7P1-201ENST00000447253 1453 ntBASIC15.83■□□□□ 0.12
RBL1P28749 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.83■□□□□ 0.12
RBL1P28749 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.83■□□□□ 0.12
RBL1P28749 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RBL1P28749 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.83■□□□□ 0.12
RBL1P28749 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.83■□□□□ 0.12
RBL1P28749 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.83■□□□□ 0.12
RBL1P28749 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBL1P28749 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.83■□□□□ 0.12
RBL1P28749 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
RBL1P28749 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RBL1P28749 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.82■□□□□ 0.12
RBL1P28749 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RBL1P28749 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.82■□□□□ 0.12
RBL1P28749 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RBL1P28749 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.82■□□□□ 0.12
RBL1P28749 AC004890.2-204ENST00000481968 304 ntBASIC15.82■□□□□ 0.12
RBL1P28749 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.82■□□□□ 0.12
RBL1P28749 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.82■□□□□ 0.12
RBL1P28749 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.82■□□□□ 0.12
RBL1P28749 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.82■□□□□ 0.12
RBL1P28749 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.82■□□□□ 0.12
RBL1P28749 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.82■□□□□ 0.12
RBL1P28749 AL390955.2-201ENST00000603032 514 ntBASIC15.82■□□□□ 0.12
RBL1P28749 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.82■□□□□ 0.12
RBL1P28749 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.82■□□□□ 0.12
RBL1P28749 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.82■□□□□ 0.12
RBL1P28749 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.82■□□□□ 0.12
RBL1P28749 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.82■□□□□ 0.12
RBL1P28749 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
RBL1P28749 AC012508.2-201ENST00000567613 1472 ntBASIC15.82■□□□□ 0.12
RBL1P28749 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RBL1P28749 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBL1P28749 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms