Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HTR1EP28566 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.83□□□□□ -0.04
HTR1EP28566 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.83□□□□□ -0.04
HTR1EP28566 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 FOXO1B-201ENST00000504678 1527 ntBASIC14.83□□□□□ -0.04
HTR1EP28566 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.83□□□□□ -0.04
HTR1EP28566 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.83□□□□□ -0.04
HTR1EP28566 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.83□□□□□ -0.04
HTR1EP28566 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.83□□□□□ -0.04
HTR1EP28566 KRT17P7-201ENST00000451704 1104 ntBASIC14.83□□□□□ -0.04
HTR1EP28566 AC105233.2-201ENST00000523697 349 ntBASIC14.83□□□□□ -0.04
HTR1EP28566 AF228730.5-201ENST00000530288 346 ntBASIC14.83□□□□□ -0.04
HTR1EP28566 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.83□□□□□ -0.04
HTR1EP28566 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
HTR1EP28566 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.83□□□□□ -0.04
HTR1EP28566 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
HTR1EP28566 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.83□□□□□ -0.04
HTR1EP28566 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HTR1EP28566 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HTR1EP28566 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.83□□□□□ -0.04
HTR1EP28566 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HTR1EP28566 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HTR1EP28566 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.82□□□□□ -0.04
HTR1EP28566 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.82□□□□□ -0.04
HTR1EP28566 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.82□□□□□ -0.04
HTR1EP28566 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 AC004890.2-204ENST00000481968 304 ntBASIC14.82□□□□□ -0.04
HTR1EP28566 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.82□□□□□ -0.04
HTR1EP28566 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 HNRNPUP1-201ENST00000554987 333 ntBASIC14.82□□□□□ -0.04
HTR1EP28566 MIR4453-201ENST00000584019 89 ntBASIC14.82□□□□□ -0.04
HTR1EP28566 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
HTR1EP28566 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 AC139749.1-202ENST00000617529 3139 ntBASIC14.82□□□□□ -0.04
HTR1EP28566 FLJ16779-201ENST00000612722 7638 ntBASIC14.82□□□□□ -0.04
HTR1EP28566 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HTR1EP28566 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HTR1EP28566 ACE3P-201ENST00000423435 1973 ntBASIC14.82□□□□□ -0.04
HTR1EP28566 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.82□□□□□ -0.04
HTR1EP28566 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms