Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.04□□□□□ -0.32
COL8A2P25067 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
COL8A2P25067 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 AC126177.1-201ENST00000547829 2218 ntBASIC13.04□□□□□ -0.32
COL8A2P25067 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
COL8A2P25067 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.04□□□□□ -0.32
COL8A2P25067 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.04□□□□□ -0.32
COL8A2P25067 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 PDIA3P1-201ENST00000471856 1510 ntBASIC13.03□□□□□ -0.32
COL8A2P25067 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
COL8A2P25067 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.03□□□□□ -0.32
COL8A2P25067 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.03□□□□□ -0.32
COL8A2P25067 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 AC092933.1-201ENST00000393644 945 ntBASIC13.03□□□□□ -0.32
COL8A2P25067 BOLA2P3-201ENST00000404566 256 ntBASIC13.03□□□□□ -0.32
COL8A2P25067 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.03□□□□□ -0.32
COL8A2P25067 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
COL8A2P25067 KRT223P-202ENST00000449164 1292 ntBASIC13.03□□□□□ -0.32
COL8A2P25067 KLF2P4-201ENST00000451959 1225 ntBASIC13.03□□□□□ -0.32
COL8A2P25067 CTBP2P5-201ENST00000454986 1264 ntBASIC13.03□□□□□ -0.32
COL8A2P25067 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.03□□□□□ -0.32
COL8A2P25067 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.03□□□□□ -0.32
COL8A2P25067 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.03□□□□□ -0.32
COL8A2P25067 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.03□□□□□ -0.32
COL8A2P25067 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 AP005117.1-202ENST00000581724 1908 ntBASIC13.03□□□□□ -0.32
COL8A2P25067 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
COL8A2P25067 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 TNRC18P2-201ENST00000417666 2714 ntBASIC13.03□□□□□ -0.32
COL8A2P25067 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.03□□□□□ -0.32
COL8A2P25067 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.03□□□□□ -0.32
COL8A2P25067 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.03□□□□□ -0.32
COL8A2P25067 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.03□□□□□ -0.32
COL8A2P25067 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COL8A2P25067 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.02□□□□□ -0.32
COL8A2P25067 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
COL8A2P25067 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.02□□□□□ -0.32
COL8A2P25067 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
COL8A2P25067 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
COL8A2P25067 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
COL8A2P25067 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
COL8A2P25067 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COL8A2P25067 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms