Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CAPN3P20807 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CAPN3P20807 AL627223.1-201ENST00000416693 442 ntBASIC14.91□□□□□ -0.02
CAPN3P20807 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.91□□□□□ -0.02
CAPN3P20807 HLA-V-201ENST00000429037 534 ntBASIC14.91□□□□□ -0.02
CAPN3P20807 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.91□□□□□ -0.02
CAPN3P20807 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 AL512356.2-201ENST00000546955 174 ntBASIC14.91□□□□□ -0.02
CAPN3P20807 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.91□□□□□ -0.02
CAPN3P20807 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.91□□□□□ -0.02
CAPN3P20807 AP000845.1-201ENST00000581677 2131 ntBASIC14.91□□□□□ -0.02
CAPN3P20807 RN7SL204P-201ENST00000582831 262 ntBASIC14.91□□□□□ -0.02
CAPN3P20807 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.91□□□□□ -0.02
CAPN3P20807 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CAPN3P20807 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.91□□□□□ -0.02
CAPN3P20807 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.91□□□□□ -0.02
CAPN3P20807 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CAPN3P20807 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.91□□□□□ -0.02
CAPN3P20807 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CAPN3P20807 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
CAPN3P20807 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.9□□□□□ -0.02
CAPN3P20807 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 AP3S2-216ENST00000617003 1561 ntBASIC14.9□□□□□ -0.02
CAPN3P20807 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.9□□□□□ -0.02
CAPN3P20807 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.9□□□□□ -0.02
CAPN3P20807 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.9□□□□□ -0.02
CAPN3P20807 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CAPN3P20807 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.9□□□□□ -0.02
CAPN3P20807 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.9□□□□□ -0.02
CAPN3P20807 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 KRT8P48-201ENST00000515599 1220 ntBASIC14.9□□□□□ -0.02
CAPN3P20807 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.9□□□□□ -0.02
CAPN3P20807 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.9□□□□□ -0.02
CAPN3P20807 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.9□□□□□ -0.02
CAPN3P20807 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.9□□□□□ -0.02
CAPN3P20807 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CAPN3P20807 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN3P20807 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CAPN3P20807 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.9□□□□□ -0.02
CAPN3P20807 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CAPN3P20807 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.89□□□□□ -0.03
CAPN3P20807 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CAPN3P20807 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.89□□□□□ -0.03
CAPN3P20807 MTHFR-210ENST00000641407 2387 ntBASIC14.89□□□□□ -0.03
CAPN3P20807 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CAPN3P20807 OR8S1-201ENST00000310194 1080 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms