Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NFKB1P19838 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NFKB1P19838 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NFKB1P19838 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NFKB1P19838 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NFKB1P19838 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NFKB1P19838 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 CICP24-201ENST00000605464 2705 ntBASIC15.69■□□□□ 0.1
NFKB1P19838 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NFKB1P19838 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NFKB1P19838 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NFKB1P19838 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 AC104457.1-201ENST00000401024 814 ntBASIC15.69■□□□□ 0.1
NFKB1P19838 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.69■□□□□ 0.1
NFKB1P19838 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.69■□□□□ 0.1
NFKB1P19838 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.69■□□□□ 0.1
NFKB1P19838 FAM86LP-201ENST00000478302 853 ntBASIC15.69■□□□□ 0.1
NFKB1P19838 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.69■□□□□ 0.1
NFKB1P19838 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
NFKB1P19838 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.69■□□□□ 0.1
NFKB1P19838 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NFKB1P19838 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NFKB1P19838 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 REXO1L2P-201ENST00000425429 2069 ntBASIC15.69■□□□□ 0.1
NFKB1P19838 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
NFKB1P19838 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.69■□□□□ 0.1
NFKB1P19838 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFKB1P19838 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.68■□□□□ 0.1
NFKB1P19838 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NFKB1P19838 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.68■□□□□ 0.1
NFKB1P19838 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.68■□□□□ 0.1
NFKB1P19838 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.68■□□□□ 0.1
NFKB1P19838 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.68■□□□□ 0.1
NFKB1P19838 AC011467.4-201ENST00000594891 528 ntBASIC15.68■□□□□ 0.1
NFKB1P19838 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NFKB1P19838 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NFKB1P19838 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NFKB1P19838 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NFKB1P19838 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 AC012508.2-201ENST00000567613 1472 ntBASIC15.67■□□□□ 0.1
NFKB1P19838 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 AJ011931.1-201ENST00000618749 2492 ntBASIC15.67■□□□□ 0.1
NFKB1P19838 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NFKB1P19838 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.67■□□□□ 0.1
NFKB1P19838 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NFKB1P19838 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.67■□□□□ 0.1
NFKB1P19838 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 242.4 ms