Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNOT4O95628 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNOT4O95628 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CNOT4O95628 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CNOT4O95628 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNOT4O95628 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CNOT4O95628 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNOT4O95628 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNOT4O95628 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNOT4O95628 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.77□□□□□ -0.21
CNOT4O95628 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.77□□□□□ -0.21
CNOT4O95628 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CNOT4O95628 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CNOT4O95628 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.77□□□□□ -0.21
CNOT4O95628 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.77□□□□□ -0.21
CNOT4O95628 ELK1P1-201ENST00000485699 580 ntBASIC13.77□□□□□ -0.21
CNOT4O95628 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.77□□□□□ -0.21
CNOT4O95628 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.77□□□□□ -0.21
CNOT4O95628 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.77□□□□□ -0.21
CNOT4O95628 KRT17P8-201ENST00000540749 863 ntBASIC13.77□□□□□ -0.21
CNOT4O95628 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.77□□□□□ -0.21
CNOT4O95628 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.77□□□□□ -0.21
CNOT4O95628 RAB43P1-201ENST00000561790 589 ntBASIC13.77□□□□□ -0.21
CNOT4O95628 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.77□□□□□ -0.21
CNOT4O95628 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 MIR8072-201ENST00000614241 80 ntBASIC13.77□□□□□ -0.21
CNOT4O95628 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.77□□□□□ -0.21
CNOT4O95628 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.77□□□□□ -0.21
CNOT4O95628 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.77□□□□□ -0.21
CNOT4O95628 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.77□□□□□ -0.21
CNOT4O95628 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNOT4O95628 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CNOT4O95628 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CNOT4O95628 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.76□□□□□ -0.21
CNOT4O95628 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.76□□□□□ -0.21
CNOT4O95628 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.76□□□□□ -0.21
CNOT4O95628 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CNOT4O95628 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.76□□□□□ -0.21
CNOT4O95628 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 MIR658-201ENST00000385210 100 ntBASIC13.76□□□□□ -0.21
CNOT4O95628 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.76□□□□□ -0.21
CNOT4O95628 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CNOT4O95628 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.76□□□□□ -0.21
CNOT4O95628 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.76□□□□□ -0.21
CNOT4O95628 ENPP7P5-201ENST00000541031 1031 ntBASIC13.76□□□□□ -0.21
CNOT4O95628 AC133539.2-201ENST00000604757 467 ntBASIC13.76□□□□□ -0.21
CNOT4O95628 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.76□□□□□ -0.21
CNOT4O95628 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.76□□□□□ -0.21
CNOT4O95628 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.76□□□□□ -0.21
CNOT4O95628 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CNOT4O95628 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CNOT4O95628 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.76□□□□□ -0.21
CNOT4O95628 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CNOT4O95628 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CNOT4O95628 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms