Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 RN7SL850P-201ENST00000579959 291 ntBASIC11.27□□□□□ -0.61
TNFRSF6BO95407 AC024267.1-201ENST00000582320 895 ntBASIC11.27□□□□□ -0.61
TNFRSF6BO95407 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 AC092119.3-201ENST00000612618 583 ntBASIC11.27□□□□□ -0.61
TNFRSF6BO95407 AC004790.2-201ENST00000623588 572 ntBASIC11.27□□□□□ -0.61
TNFRSF6BO95407 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 AC018529.2-202ENST00000611482 3087 ntBASIC11.27□□□□□ -0.61
TNFRSF6BO95407 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.27□□□□□ -0.61
TNFRSF6BO95407 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AC152010.1-201ENST00000415779 2006 ntBASIC11.26□□□□□ -0.61
TNFRSF6BO95407 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AC131212.3-201ENST00000624087 4219 ntBASIC11.26□□□□□ -0.61
TNFRSF6BO95407 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.26□□□□□ -0.61
TNFRSF6BO95407 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AC011467.4-201ENST00000594891 528 ntBASIC11.26□□□□□ -0.61
TNFRSF6BO95407 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TNFRSF6BO95407 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms