Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIOO75962 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TRIOO75962 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRIOO75962 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRIOO75962 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIOO75962 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIOO75962 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIOO75962 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRIOO75962 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRIOO75962 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIOO75962 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIOO75962 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TRIOO75962 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIOO75962 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIOO75962 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIOO75962 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 KRT18P9-201ENST00000604826 1300 ntBASIC15.28■□□□□ 0.04
TRIOO75962 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRIOO75962 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRIOO75962 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIOO75962 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIOO75962 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 RPL8P2-201ENST00000430538 502 ntBASIC15.28■□□□□ 0.04
TRIOO75962 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 AP000911.2-201ENST00000534330 502 ntBASIC15.28■□□□□ 0.04
TRIOO75962 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRIOO75962 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRIOO75962 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIOO75962 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIOO75962 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIOO75962 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRIOO75962 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIOO75962 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIOO75962 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIOO75962 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIOO75962 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIOO75962 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIOO75962 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIOO75962 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIOO75962 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIOO75962 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIOO75962 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
TRIOO75962 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIOO75962 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIOO75962 ENPP7P8-202ENST00000527856 1345 ntBASIC15.27■□□□□ 0.03
TRIOO75962 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.27■□□□□ 0.03
TRIOO75962 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.27■□□□□ 0.03
TRIOO75962 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIOO75962 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIOO75962 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIOO75962 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIOO75962 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TRIOO75962 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIOO75962 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIOO75962 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.27■□□□□ 0.03
TRIOO75962 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIOO75962 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.27■□□□□ 0.03
TRIOO75962 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TRIOO75962 AC009560.1-201ENST00000620208 434 ntBASIC15.27■□□□□ 0.03
TRIOO75962 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.27■□□□□ 0.03
TRIOO75962 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIOO75962 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIOO75962 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIOO75962 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRIOO75962 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRIOO75962 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIOO75962 AL583805.1-201ENST00000391389 531 ntBASIC15.26■□□□□ 0.03
TRIOO75962 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRIOO75962 AC004837.1-201ENST00000446267 564 ntBASIC15.26■□□□□ 0.03
TRIOO75962 AC004066.1-201ENST00000502488 802 ntBASIC15.26■□□□□ 0.03
TRIOO75962 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIOO75962 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.26■□□□□ 0.03
TRIOO75962 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIOO75962 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIOO75962 REXO1L4P-201ENST00000605109 1937 ntBASIC15.26■□□□□ 0.03
TRIOO75962 TNRC18P3-201ENST00000441896 2691 ntBASIC15.26■□□□□ 0.03
TRIOO75962 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIOO75962 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIOO75962 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIOO75962 HLA-DMA-203ENST00000395305 777 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms