Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SMARCA5O60264 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 AC104457.1-201ENST00000401024 814 ntBASIC19■□□□□ 0.63
SMARCA5O60264 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19■□□□□ 0.63
SMARCA5O60264 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19■□□□□ 0.63
SMARCA5O60264 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 AL359711.2-201ENST00000563105 872 ntBASIC19■□□□□ 0.63
SMARCA5O60264 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19■□□□□ 0.63
SMARCA5O60264 SAMD11P1-201ENST00000571429 661 ntBASIC19■□□□□ 0.63
SMARCA5O60264 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19■□□□□ 0.63
SMARCA5O60264 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SMARCA5O60264 AC093726.1-201ENST00000608064 963 ntBASIC19■□□□□ 0.63
SMARCA5O60264 AC099568.2-201ENST00000609194 695 ntBASIC19■□□□□ 0.63
SMARCA5O60264 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SMARCA5O60264 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19■□□□□ 0.63
SMARCA5O60264 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SMARCA5O60264 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19■□□□□ 0.63
SMARCA5O60264 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19■□□□□ 0.63
SMARCA5O60264 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCA5O60264 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
SMARCA5O60264 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.99■□□□□ 0.63
SMARCA5O60264 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.99■□□□□ 0.63
SMARCA5O60264 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SMARCA5O60264 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.99■□□□□ 0.63
SMARCA5O60264 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SMARCA5O60264 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.99■□□□□ 0.63
SMARCA5O60264 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SMARCA5O60264 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.99■□□□□ 0.63
SMARCA5O60264 MEP1AP4-201ENST00000423244 1087 ntBASIC18.99■□□□□ 0.63
SMARCA5O60264 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.99■□□□□ 0.63
SMARCA5O60264 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.99■□□□□ 0.63
SMARCA5O60264 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.99■□□□□ 0.63
SMARCA5O60264 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.99■□□□□ 0.63
SMARCA5O60264 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.99■□□□□ 0.63
SMARCA5O60264 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.99■□□□□ 0.63
SMARCA5O60264 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.99■□□□□ 0.63
SMARCA5O60264 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.99■□□□□ 0.63
SMARCA5O60264 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.99■□□□□ 0.63
SMARCA5O60264 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCA5O60264 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.99■□□□□ 0.63
SMARCA5O60264 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.98■□□□□ 0.63
SMARCA5O60264 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCA5O60264 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
SMARCA5O60264 AC007787.1-201ENST00000588095 1583 ntBASIC18.98■□□□□ 0.63
SMARCA5O60264 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SMARCA5O60264 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 REXO1L5P-201ENST00000622260 2098 ntBASIC18.98■□□□□ 0.63
SMARCA5O60264 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
SMARCA5O60264 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 AC092552.1-201ENST00000547243 906 ntBASIC18.98■□□□□ 0.63
SMARCA5O60264 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.98■□□□□ 0.63
SMARCA5O60264 RRP7BP-205ENST00000566851 833 ntBASIC18.98■□□□□ 0.63
SMARCA5O60264 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.98■□□□□ 0.63
SMARCA5O60264 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCA5O60264 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SMARCA5O60264 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms