Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PHGDHO43175 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 AC139749.1-202ENST00000617529 3139 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.4■□□□□ 0.06
PHGDHO43175 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PHGDHO43175 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.4■□□□□ 0.06
PHGDHO43175 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 SERBP1P3-201ENST00000459980 809 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 AC069262.1-201ENST00000539058 672 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.4■□□□□ 0.06
PHGDHO43175 AL512356.2-201ENST00000546955 174 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.4■□□□□ 0.06
PHGDHO43175 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.4■□□□□ 0.06
PHGDHO43175 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.4■□□□□ 0.06
PHGDHO43175 LINC01115-203ENST00000606068 577 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 AL596442.2-201ENST00000610240 980 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 SPDYE12P-201ENST00000618416 771 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 AC134684.3-201ENST00000641758 218 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.4■□□□□ 0.06
PHGDHO43175 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
PHGDHO43175 AL359258.3-201ENST00000622910 2331 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 REXO1L2P-201ENST00000425429 2069 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 CICP14-201ENST00000629111 2732 ntBASIC15.4■□□□□ 0.06
PHGDHO43175 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PHGDHO43175 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PHGDHO43175 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.39■□□□□ 0.05
PHGDHO43175 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.39■□□□□ 0.05
PHGDHO43175 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.39■□□□□ 0.05
PHGDHO43175 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PHGDHO43175 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.39■□□□□ 0.05
PHGDHO43175 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.39■□□□□ 0.05
PHGDHO43175 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.39■□□□□ 0.05
PHGDHO43175 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.39■□□□□ 0.05
PHGDHO43175 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.39■□□□□ 0.05
PHGDHO43175 AP006288.1-201ENST00000446065 395 ntBASIC15.39■□□□□ 0.05
PHGDHO43175 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 AC109322.1-201ENST00000524499 1264 ntBASIC15.39■□□□□ 0.05
PHGDHO43175 AL512361.1-201ENST00000554200 418 ntBASIC15.39■□□□□ 0.05
PHGDHO43175 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PHGDHO43175 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.39■□□□□ 0.05
PHGDHO43175 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.39■□□□□ 0.05
PHGDHO43175 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.39■□□□□ 0.05
PHGDHO43175 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.39■□□□□ 0.05
PHGDHO43175 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHGDHO43175 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms