Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHL1O00533 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHL1O00533 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHL1O00533 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHL1O00533 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.62■□□□□ 0.73
CHL1O00533 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CHL1O00533 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CHL1O00533 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.61■□□□□ 0.73
CHL1O00533 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHL1O00533 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHL1O00533 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.61■□□□□ 0.73
CHL1O00533 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.61■□□□□ 0.73
CHL1O00533 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CHL1O00533 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.61■□□□□ 0.73
CHL1O00533 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.61■□□□□ 0.73
CHL1O00533 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.61■□□□□ 0.73
CHL1O00533 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHL1O00533 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.61■□□□□ 0.73
CHL1O00533 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHL1O00533 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.61■□□□□ 0.73
CHL1O00533 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHL1O00533 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.6■□□□□ 0.73
CHL1O00533 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHL1O00533 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.6■□□□□ 0.73
CHL1O00533 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.6■□□□□ 0.73
CHL1O00533 TUBB1P2-201ENST00000422712 1306 ntBASIC19.6■□□□□ 0.73
CHL1O00533 TUBB1P1-201ENST00000503144 1300 ntBASIC19.6■□□□□ 0.73
CHL1O00533 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHL1O00533 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.6■□□□□ 0.73
CHL1O00533 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHL1O00533 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.6■□□□□ 0.73
CHL1O00533 AC106820.3-201ENST00000561653 397 ntBASIC19.6■□□□□ 0.73
CHL1O00533 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.6■□□□□ 0.73
CHL1O00533 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.6■□□□□ 0.73
CHL1O00533 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.6■□□□□ 0.73
CHL1O00533 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 REXO1L6P-201ENST00000603433 1515 ntBASIC19.6■□□□□ 0.73
CHL1O00533 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.6■□□□□ 0.73
CHL1O00533 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.6■□□□□ 0.73
CHL1O00533 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.6■□□□□ 0.73
CHL1O00533 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHL1O00533 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHL1O00533 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHL1O00533 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHL1O00533 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHL1O00533 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHL1O00533 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.59■□□□□ 0.73
CHL1O00533 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHL1O00533 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHL1O00533 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.59■□□□□ 0.73
CHL1O00533 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHL1O00533 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHL1O00533 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHL1O00533 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.59■□□□□ 0.73
CHL1O00533 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHL1O00533 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHL1O00533 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHL1O00533 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHL1O00533 MIR1908-201ENST00000410394 80 ntBASIC19.59■□□□□ 0.73
CHL1O00533 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.59■□□□□ 0.73
CHL1O00533 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.59■□□□□ 0.73
CHL1O00533 YBX1P6-201ENST00000442962 1002 ntBASIC19.59■□□□□ 0.73
CHL1O00533 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHL1O00533 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.59■□□□□ 0.73
CHL1O00533 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.59■□□□□ 0.73
CHL1O00533 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CHL1O00533 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms