Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.8□□□□□ -0.52
COLCA2A8K830 AL365330.1-201ENST00000607459 531 ntBASIC11.8□□□□□ -0.52
COLCA2A8K830 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
COLCA2A8K830 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.8□□□□□ -0.52
COLCA2A8K830 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
COLCA2A8K830 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
COLCA2A8K830 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
COLCA2A8K830 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.8□□□□□ -0.52
COLCA2A8K830 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COLCA2A8K830 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.79□□□□□ -0.52
COLCA2A8K830 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
COLCA2A8K830 AL354702.1-201ENST00000442006 1960 ntBASIC11.79□□□□□ -0.52
COLCA2A8K830 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
COLCA2A8K830 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.79□□□□□ -0.52
COLCA2A8K830 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.79□□□□□ -0.52
COLCA2A8K830 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.79□□□□□ -0.52
COLCA2A8K830 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
COLCA2A8K830 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.79□□□□□ -0.52
COLCA2A8K830 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
COLCA2A8K830 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.79□□□□□ -0.52
COLCA2A8K830 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 AC136604.1-202ENST00000425471 771 ntBASIC11.79□□□□□ -0.52
COLCA2A8K830 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.79□□□□□ -0.52
COLCA2A8K830 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.79□□□□□ -0.52
COLCA2A8K830 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.79□□□□□ -0.52
COLCA2A8K830 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.79□□□□□ -0.52
COLCA2A8K830 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.79□□□□□ -0.52
COLCA2A8K830 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 NCLP1-201ENST00000445357 1963 ntBASIC11.79□□□□□ -0.52
COLCA2A8K830 AGAP10P-201ENST00000454844 2418 ntBASIC11.79□□□□□ -0.52
COLCA2A8K830 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.79□□□□□ -0.52
COLCA2A8K830 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.79□□□□□ -0.52
COLCA2A8K830 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.79□□□□□ -0.52
COLCA2A8K830 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.79□□□□□ -0.52
COLCA2A8K830 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COLCA2A8K830 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
COLCA2A8K830 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.78□□□□□ -0.52
COLCA2A8K830 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.78□□□□□ -0.52
COLCA2A8K830 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.78□□□□□ -0.52
COLCA2A8K830 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
COLCA2A8K830 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
COLCA2A8K830 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.78□□□□□ -0.52
COLCA2A8K830 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
COLCA2A8K830 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
COLCA2A8K830 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.78□□□□□ -0.52
COLCA2A8K830 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.78□□□□□ -0.52
COLCA2A8K830 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COLCA2A8K830 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms