Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 MIR943-201ENST00000401286 94 ntBASIC12.45□□□□□ -0.42
SRRM4A7MD48 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.45□□□□□ -0.42
SRRM4A7MD48 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.45□□□□□ -0.42
SRRM4A7MD48 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 ZNF890P-202ENST00000530367 1156 ntBASIC12.45□□□□□ -0.42
SRRM4A7MD48 DUX4L27-201ENST00000554796 1261 ntBASIC12.45□□□□□ -0.42
SRRM4A7MD48 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 AC139530.3-201ENST00000620344 690 ntBASIC12.45□□□□□ -0.42
SRRM4A7MD48 AC004461.2-201ENST00000629517 803 ntBASIC12.45□□□□□ -0.42
SRRM4A7MD48 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.45□□□□□ -0.42
SRRM4A7MD48 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SRRM4A7MD48 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 KRT18P28-201ENST00000453838 1332 ntBASIC12.44□□□□□ -0.42
SRRM4A7MD48 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.44□□□□□ -0.42
SRRM4A7MD48 TSSK5P-201ENST00000423978 907 ntBASIC12.44□□□□□ -0.42
SRRM4A7MD48 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 KRT18P43-201ENST00000469825 1281 ntBASIC12.44□□□□□ -0.42
SRRM4A7MD48 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SRRM4A7MD48 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SRRM4A7MD48 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.43□□□□□ -0.42
SRRM4A7MD48 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms