Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 AJ011931.1-201ENST00000618749 2492 ntBASIC14.97□□□□□ -0.01
RNF103-CHMP3A0A140T963 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 KRT8P37-201ENST00000451609 1420 ntBASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 MIR4313-201ENST00000580760 101 ntBASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 AP3S2-216ENST00000617003 1561 ntBASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF103-CHMP3A0A140T963 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
RNF103-CHMP3A0A140T963 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RNF103-CHMP3A0A140T963 KRT8P44-201ENST00000441609 1350 ntBASIC14.96□□□□□ -0.02
RNF103-CHMP3A0A140T963 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF103-CHMP3A0A140T963 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF103-CHMP3A0A140T963 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RNF103-CHMP3A0A140T963 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.96□□□□□ -0.02
RNF103-CHMP3A0A140T963 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC009090.5-201ENST00000624886 2285 ntBASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF103-CHMP3A0A140T963 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms