Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 AC018529.2-202ENST00000611482 3087 ntBASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 AC132008.2-207ENST00000454517 770 ntBASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 AC064862.7-201ENST00000604520 867 ntBASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRCH1Q9Y2L9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 NCF1C-201ENST00000438382 1427 ntBASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 SPDYE21P-201ENST00000413323 827 ntBASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AC079781.3-201ENST00000449110 356 ntBASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AC106795.1-205ENST00000512851 1056 ntBASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AL662844.1-201ENST00000546340 181 ntBASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AC008608.2-201ENST00000606089 416 ntBASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AL353135.1-201ENST00000606729 504 ntBASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 AC019294.4-201ENST00000561777 2905 ntBASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
LRCH1Q9Y2L9 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms