Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 FAM21FP-201ENST00000426241 1131 ntBASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 CTBP2P5-201ENST00000454986 1264 ntBASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 RNA5SP412-201ENST00000516234 123 ntBASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AP001063.1-201ENST00000568332 529 ntBASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AC124283.3-201ENST00000570869 594 ntBASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 MIR4259-201ENST00000584466 101 ntBASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AL033527.4-201ENST00000641026 673 ntBASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 KRT8P44-201ENST00000441609 1350 ntBASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 DBET-201ENST00000630918 3363 ntBASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 PDIA3P1-201ENST00000471856 1510 ntBASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FOXD3Q9UJU5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 AL109954.1-202ENST00000564051 2148 ntBASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
FOXD3Q9UJU5 BAATP1-201ENST00000412284 1225 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms