Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 AC092364.2-202ENST00000597012 1073 ntBASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 AC005252.2-201ENST00000624630 1141 ntBASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 LILRP1-201ENST00000444199 1370 ntBASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 LINC02228-204ENST00000642115 2962 ntBASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 FGD5P1-202ENST00000614866 2498 ntBASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BLOC1S4Q9NUP1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 AC138761.1-201ENST00000584393 385 ntBASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 RPSAP52-203ENST00000622976 1023 ntBASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BLOC1S4Q9NUP1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 AL645937.2-201ENST00000396808 931 ntBASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BLOC1S4Q9NUP1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms