Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AC073439.1-201ENST00000624121 1774 ntBASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AC133065.6-201ENST00000625054 2378 ntBASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ANKRD20A7P-201ENST00000402318 2414 ntBASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 AC111170.3-201ENST00000624282 2464 ntBASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 AGGF1P10-201ENST00000635005 2191 ntBASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 AC002558.1-201ENST00000488906 803 ntBASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 AL031432.4-201ENST00000641729 2190 ntBASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42SE1Q9NRR8 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms