Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 AC012618.1-201ENST00000461223 412 ntBASIC16.74■□□□□ 0.27
HIPK3Q9H422 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
HIPK3Q9H422 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIPK3Q9H422 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 AC103702.1-201ENST00000548801 2630 ntBASIC16.73■□□□□ 0.27
HIPK3Q9H422 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 RNMTL1P1-201ENST00000454103 560 ntBASIC16.73■□□□□ 0.27
HIPK3Q9H422 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 PCDHA1-201ENST00000378133 2726 ntBASIC16.73■□□□□ 0.27
HIPK3Q9H422 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIPK3Q9H422 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.73■□□□□ 0.27
HIPK3Q9H422 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIPK3Q9H422 RPL17P11-201ENST00000417593 544 ntBASIC16.72■□□□□ 0.27
HIPK3Q9H422 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 AL596276.2-201ENST00000447525 331 ntBASIC16.72■□□□□ 0.27
HIPK3Q9H422 AC008267.1-201ENST00000474858 1069 ntBASIC16.72■□□□□ 0.27
HIPK3Q9H422 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.72■□□□□ 0.27
HIPK3Q9H422 AL161670.2-201ENST00000557650 1227 ntBASIC16.72■□□□□ 0.27
HIPK3Q9H422 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms