Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 GHSR-202ENST00000427970 912 ntBASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 AC004835.2-201ENST00000603762 682 ntBASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 AC003101.2-201ENST00000612557 442 ntBASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 AC009093.7-201ENST00000623853 1223 ntBASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 AL645728.2-202ENST00000641679 227 ntBASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J3Q9H1A7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.33□□□□□ -0.11
POLR2J3Q9H1A7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
POLR2J3Q9H1A7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
POLR2J3Q9H1A7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
POLR2J3Q9H1A7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
POLR2J3Q9H1A7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 AC004461.1-201ENST00000412461 403 ntBASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 SPDYE7P-202ENST00000420373 878 ntBASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 FAM58DP-201ENST00000428076 619 ntBASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 SERBP1P3-201ENST00000459980 809 ntBASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 MIR6069-201ENST00000620069 79 ntBASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 AC005912.2-201ENST00000619492 2400 ntBASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J3Q9H1A7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 AL359258.3-201ENST00000622910 2331 ntBASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms