Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.07□□□□□ -0.48
NDUFAF3Q9BU61 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 DNM1P41-201ENST00000623634 3350 ntBASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 AC004967.1-201ENST00000453589 447 ntBASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 MIR4492-201ENST00000581627 80 ntBASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 REXO1L3P-201ENST00000622202 1288 ntBASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 AC092135.3-201ENST00000624151 1846 ntBASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFAF3Q9BU61 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AC106818.1-201ENST00000623223 3242 ntBASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFAF3Q9BU61 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms