Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC092638.2-201ENST00000441105 947 ntBASIC19.85■□□□□ 0.77
ABCA3Q99758 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC19.85■□□□□ 0.77
ABCA3Q99758 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.85■□□□□ 0.77
ABCA3Q99758 AC007952.4-201ENST00000573866 637 ntBASIC19.85■□□□□ 0.77
ABCA3Q99758 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ABCA3Q99758 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.84■□□□□ 0.77
ABCA3Q99758 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.84■□□□□ 0.77
ABCA3Q99758 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ABCA3Q99758 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.84■□□□□ 0.77
ABCA3Q99758 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ABCA3Q99758 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC19.84■□□□□ 0.77
ABCA3Q99758 AL354861.1-201ENST00000445213 355 ntBASIC19.84■□□□□ 0.77
ABCA3Q99758 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC19.84■□□□□ 0.77
ABCA3Q99758 AP000911.2-201ENST00000534330 502 ntBASIC19.84■□□□□ 0.77
ABCA3Q99758 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ABCA3Q99758 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC19.84■□□□□ 0.77
ABCA3Q99758 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC19.84■□□□□ 0.77
ABCA3Q99758 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.84■□□□□ 0.77
ABCA3Q99758 BX088702.1-201ENST00000610784 235 ntBASIC19.84■□□□□ 0.77
ABCA3Q99758 LINC00431-202ENST00000636375 159 ntBASIC19.84■□□□□ 0.77
ABCA3Q99758 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ABCA3Q99758 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ABCA3Q99758 HLA-DQB1-202ENST00000399079 1501 ntBASIC19.84■□□□□ 0.77
ABCA3Q99758 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA3Q99758 KRT8P28-201ENST00000433288 1390 ntBASIC19.83■□□□□ 0.77
ABCA3Q99758 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ABCA3Q99758 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.83■□□□□ 0.77
ABCA3Q99758 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ABCA3Q99758 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 RN7SKP109-201ENST00000410592 316 ntBASIC19.83■□□□□ 0.77
ABCA3Q99758 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.83■□□□□ 0.77
ABCA3Q99758 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.83■□□□□ 0.77
ABCA3Q99758 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC19.83■□□□□ 0.77
ABCA3Q99758 MIR4472-1-201ENST00000584349 80 ntBASIC19.83■□□□□ 0.77
ABCA3Q99758 ETV2-207ENST00000619399 994 ntTSL 5 BASIC19.83■□□□□ 0.77
ABCA3Q99758 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.83■□□□□ 0.77
ABCA3Q99758 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA3Q99758 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ABCA3Q99758 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ABCA3Q99758 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ABCA3Q99758 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.83■□□□□ 0.76
ABCA3Q99758 CICP11-201ENST00000434745 2827 ntBASIC19.83■□□□□ 0.76
ABCA3Q99758 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC19.83■□□□□ 0.76
ABCA3Q99758 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ABCA3Q99758 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
ABCA3Q99758 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.83■□□□□ 0.76
ABCA3Q99758 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
ABCA3Q99758 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ABCA3Q99758 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ABCA3Q99758 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ABCA3Q99758 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.82■□□□□ 0.76
ABCA3Q99758 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC19.82■□□□□ 0.76
ABCA3Q99758 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC19.82■□□□□ 0.76
ABCA3Q99758 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC19.82■□□□□ 0.76
ABCA3Q99758 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC19.82■□□□□ 0.76
ABCA3Q99758 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.82■□□□□ 0.76
ABCA3Q99758 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC19.82■□□□□ 0.76
ABCA3Q99758 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ABCA3Q99758 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ABCA3Q99758 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.82■□□□□ 0.76
ABCA3Q99758 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.82■□□□□ 0.76
ABCA3Q99758 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
ABCA3Q99758 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA3Q99758 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms