Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AQP7P2-201ENST00000453967 1041 ntBASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 HNRNPA1P42-201ENST00000458678 957 ntBASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 MIR4522-201ENST00000584932 87 ntBASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 AQP7P3-201ENST00000624547 1041 ntBASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 MBLAC2-202ENST00000514906 1936 ntBASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 AC093909.3-201ENST00000504783 336 ntBASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 AC004686.1-201ENST00000605113 538 ntBASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 LINC00634-202ENST00000505157 222 ntBASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AC024909.3-201ENST00000611513 2257 ntBASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AC053503.3-201ENST00000448375 114 ntBASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 RN7SL258P-201ENST00000478664 300 ntBASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AL157414.3-201ENST00000624276 1954 ntBASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 CR383656.3-201ENST00000551315 183 ntBASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AC026803.1-201ENST00000569130 274 ntBASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms